Botswana AMR Implementation Guide
0.1.0 - 0.1.0

Botswana AMR Implementation Guide - Local Development build (v0.1.0) built by the FHIR (HL7® FHIR® Standard) Build Tools. See the Directory of published versions

Table of Contents

.. 0 Table of Contents
... 1 Home
... 2 Background
... 3 Implementation
... 4 Use Cases
... 5 Artifacts Summary
.... 5.1 Export WHONET Flat File
.... 5.2 Botswana AMR DiagnosticReport
.... 5.3 Botswana AMR Encounter
.... 5.4 Botswana AMR Gram Stain Observation
.... 5.5 Botswana AMR Organism Identification Observation
.... 5.6 Botswana AMR Patient
.... 5.7 Botswana AMR Special Test Observation
.... 5.8 Botswana AMR Specimen
.... 5.9 Botswana AMR Susceptibility Observation
.... 5.10 Specimen Collection Location
.... 5.11 Botswana AMR Antibiotic Susceptibility LOINC
.... 5.12 Botswana AMR AST Method
.... 5.13 Botswana AMR Gram Stain Results
.... 5.14 Botswana AMR Interpretation
.... 5.15 Botswana AMR Organism Identification Methods
.... 5.16 Botswana AMR Organism ValueSet
.... 5.17 Botswana AMR Special Tests
.... 5.18 Botswana AMR Specimen Collection Sites
.... 5.19 Botswana AMR Specimen Type VS
.... 5.20 Botswana AMR Test Result Status
.... 5.21 Botswana AMR Ward Type
.... 5.22 Botswana AMR Local Identification Method Codes
.... 5.23 Botswana AMR Local Organism Codes
.... 5.24 WHONET Antibiotic Codes to LOINC Susceptibility Codes
.... 5.25 WHONET Antibiotic Codes to SNOMED CT Substance Codes
.... 5.26 WHONET Antibiotic Codes to WHO ATC Classification
.... 5.27 WHONET Organism Codes to SNOMED CT
.... 5.28 E. coli Special Test - ESBL (Negative)
.... 5.29 E. coli Susceptibility - Amoxicillin/Clavulanate (S)
.... 5.30 E. coli Susceptibility - Ampicillin (R)
.... 5.31 E. coli Susceptibility - Ceftriaxone (S)
.... 5.32 E. coli Susceptibility - Ciprofloxacin (R)
.... 5.33 E. coli Susceptibility - Gentamicin (S)
.... 5.34 E. coli Susceptibility - Nitrofurantoin (S)
.... 5.35 E. coli Susceptibility - Trimethoprim/Sulfamethoxazole (R)
.... 5.36 Example AMR Diagnostic Report - Urine Culture
.... 5.37 Example Encounter - Inpatient at Princess Marina Hospital
.... 5.38 Example Gram Stain - Gram-negative
.... 5.39 Example Organism - Escherichia coli (Isolate 1)
.... 5.40 Example Organism - Klebsiella pneumoniae (Isolate 2)
.... 5.41 Example Patient - Keabetswe Motswana
.... 5.42 Example Specimen - Mid-stream Urine
.... 5.43 Klebsiella Special Test - ESBL (Negative)
.... 5.44 Klebsiella Susceptibility - Amoxicillin/Clavulanate (I)
.... 5.45 Klebsiella Susceptibility - Ampicillin (R)
.... 5.46 Klebsiella Susceptibility - Ceftriaxone (S)
.... 5.47 Klebsiella Susceptibility - Ciprofloxacin (S)
.... 5.48 Klebsiella Susceptibility - Gentamicin (S)
.... 5.49 Klebsiella Susceptibility - Meropenem (S)