Botswana AMR Implementation Guide
0.1.0 - 0.1.0

Botswana AMR Implementation Guide - Local Development build (v0.1.0) built by the FHIR (HL7® FHIR® Standard) Build Tools. See the Directory of published versions

: Botswana AMR Organism Identification Methods - TTL Representation

Draft as of 2026-03-13

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@prefix fhir: <http://hl7.org/fhir/> .
@prefix owl: <http://www.w3.org/2002/07/owl#> .
@prefix rdf: <http://www.w3.org/1999/02/22-rdf-syntax-ns#> .
@prefix rdfs: <http://www.w3.org/2000/01/rdf-schema#> .
@prefix xsd: <http://www.w3.org/2001/XMLSchema#> .

# - resource -------------------------------------------------------------------

 a fhir:ValueSet ;
  fhir:nodeRole fhir:treeRoot ;
  fhir:id [ fhir:v "botswana-amr-identification-method-vs"] ; # 
  fhir:text [
fhir:status [ fhir:v "extensions" ] ;
fhir:div [ fhir:v "<div xmlns=\"http://www.w3.org/1999/xhtml\"><p class=\"res-header-id\"><b>Generated Narrative: ValueSet botswana-amr-identification-method-vs</b></p><a name=\"botswana-amr-identification-method-vs\"> </a><a name=\"hcbotswana-amr-identification-method-vs\"> </a><p>This value set includes codes based on the following rules:</p><ul><li>Include these codes as defined in <a href=\"http://www.snomed.org/\"><code>http://snomed.info/sct</code></a><span title=\"Version is not explicitly stated. No matching Code System found\"> version Not Stated (use latest from terminology server)</span><table class=\"none\"><tr><td style=\"white-space:nowrap\"><b>Code</b></td><td><b>Display</b></td></tr><tr><td><a href=\"http://snomed.info/id/258066000\">258066000</a></td><td>Automated identification system</td></tr><tr><td><a href=\"http://snomed.info/id/252398009\">252398009</a></td><td>Biochemical identification</td></tr><tr><td><a href=\"http://snomed.info/id/87273009\">87273009</a></td><td>Manual method</td></tr></table></li><li>Include these codes as defined in <a href=\"CodeSystem-botswana-amr-local-method-cs.html\"><code>http://bw.health.gov/fhir/amr/CodeSystem/botswana-amr-local-method-cs</code></a><span title=\"Version is not explicitly stated, which means it is fixed to the version provided in this specification\"> version ?0.1.0</span><table class=\"none\"><tr><td style=\"white-space:nowrap\"><b>Code</b></td><td><b>Display</b></td><td><b>Definition</b></td></tr><tr><td><a href=\"CodeSystem-botswana-amr-local-method-cs.html#botswana-amr-local-method-cs-vitek\">vitek</a></td><td>Vitek automated system</td><td>bioMérieux Vitek automated identification and susceptibility testing system</td></tr><tr><td><a href=\"CodeSystem-botswana-amr-local-method-cs.html#botswana-amr-local-method-cs-phoenix\">phoenix</a></td><td>Phoenix automated system</td><td>BD Phoenix automated identification and susceptibility testing system</td></tr><tr><td><a href=\"CodeSystem-botswana-amr-local-method-cs.html#botswana-amr-local-method-cs-api\">api</a></td><td>API biochemical strips</td><td>bioMérieux API manual biochemical identification strips</td></tr><tr><td><a href=\"CodeSystem-botswana-amr-local-method-cs.html#botswana-amr-local-method-cs-manual\">manual</a></td><td>Manual biochemical testing</td><td>Traditional manual biochemical identification methods</td></tr></table></li></ul></div>"^^rdf:XMLLiteral ]
  ] ; # 
  fhir:url [
fhir:v "http://bw.health.gov/fhir/amr/ValueSet/botswana-amr-identification-method-vs"^^xsd:anyURI ;
fhir:l <http://bw.health.gov/fhir/amr/ValueSet/botswana-amr-identification-method-vs>
  ] ; # 
  fhir:version [ fhir:v "0.1.0"] ; # 
  fhir:name [ fhir:v "BotswanaAMRIdentificationMethodVS"] ; # 
  fhir:title [ fhir:v "Botswana AMR Organism Identification Methods"] ; # 
  fhir:status [ fhir:v "draft"] ; # 
  fhir:date [ fhir:v "2026-03-13T21:27:21-04:00"^^xsd:dateTime] ; # 
  fhir:publisher [ fhir:v "University of Botswana Partnership"] ; # 
  fhir:contact ( [
fhir:name [ fhir:v "University of Botswana Partnership" ] ;
    ( fhir:telecom [
fhir:system [ fhir:v "url" ] ;
fhir:value [ fhir:v "https://github.com/Dokotela/bw-amr-ig" ]     ] )
  ] ) ; # 
  fhir:description [ fhir:v "Methods used for organism identification in Botswana AMR surveillance"] ; # 
  fhir:compose [
    ( fhir:include [
fhir:system [
fhir:v "http://snomed.info/sct"^^xsd:anyURI ;
fhir:l <http://snomed.info/sct>       ] ;
      ( fhir:concept [
fhir:code [ fhir:v "258066000" ] ;
fhir:display [ fhir:v "Automated identification system" ]       ] [
fhir:code [ fhir:v "252398009" ] ;
fhir:display [ fhir:v "Biochemical identification" ]       ] [
fhir:code [ fhir:v "87273009" ] ;
fhir:display [ fhir:v "Manual method" ]       ] )     ] [
fhir:system [
fhir:v "http://bw.health.gov/fhir/amr/CodeSystem/botswana-amr-local-method-cs"^^xsd:anyURI ;
fhir:l <http://bw.health.gov/fhir/amr/CodeSystem/botswana-amr-local-method-cs>       ] ;
      ( fhir:concept [
fhir:code [ fhir:v "vitek" ] ;
fhir:display [ fhir:v "Vitek automated system" ]       ] [
fhir:code [ fhir:v "phoenix" ] ;
fhir:display [ fhir:v "Phoenix automated system" ]       ] [
fhir:code [ fhir:v "api" ] ;
fhir:display [ fhir:v "API biochemical strips" ]       ] [
fhir:code [ fhir:v "manual" ] ;
fhir:display [ fhir:v "Manual biochemical testing" ]       ] )     ] )
  ] . #