Botswana AMR Implementation Guide
0.1.0 - 0.1.0
Botswana AMR Implementation Guide - Local Development build (v0.1.0) built by the FHIR (HL7® FHIR® Standard) Build Tools. See the Directory of published versions
| Draft as of 2026-03-13 |
<ValueSet xmlns="http://hl7.org/fhir">
<id value="botswana-amr-antibiotic-susceptibility-loinc"/>
<text>
<status value="generated"/>
<div xmlns="http://www.w3.org/1999/xhtml"><p class="res-header-id"><b>Generated Narrative: ValueSet botswana-amr-antibiotic-susceptibility-loinc</b></p><a name="botswana-amr-antibiotic-susceptibility-loinc"> </a><a name="hcbotswana-amr-antibiotic-susceptibility-loinc"> </a><ul><li>Include these codes as defined in <a href="http://loinc.org"><code>http://loinc.org</code></a><span title="Version is not explicitly stated. No matching Code System found"> version Not Stated (use latest from terminology server)</span><table class="none"><tr><td style="white-space:nowrap"><b>Code</b></td><td><b>Display</b></td></tr><tr><td><a href="https://loinc.org/50545-3/">50545-3</a></td><td>Bacterial susceptibility panel by Minimum inhibitory concentration (MIC)</td></tr><tr><td><a href="https://loinc.org/12-5/">12-5</a></td><td>Amikacin [Susceptibility] by Minimum inhibitory concentration (MIC)</td></tr><tr><td><a href="https://loinc.org/20-8/">20-8</a></td><td>Amoxicillin+Clavulanate [Susceptibility] by Minimum inhibitory concentration (MIC)</td></tr><tr><td><a href="https://loinc.org/28-1/">28-1</a></td><td>Ampicillin [Susceptibility] by Minimum inhibitory concentration (MIC)</td></tr><tr><td><a href="https://loinc.org/32-3/">32-3</a></td><td>Ampicillin+Sulbactam [Susceptibility] by Minimum inhibitory concentration (MIC)</td></tr><tr><td><a href="https://loinc.org/36-4/">36-4</a></td><td>Azithromycin [Susceptibility] by Minimum inhibitory concentration (MIC)</td></tr><tr><td><a href="https://loinc.org/44-8/">44-8</a></td><td>Aztreonam [Susceptibility] by Minimum inhibitory concentration (MIC)</td></tr><tr><td><a href="https://loinc.org/76-0/">76-0</a></td><td>Cefazolin [Susceptibility] by Minimum inhibitory concentration (MIC)</td></tr><tr><td><a href="https://loinc.org/6644-9/">6644-9</a></td><td>Cefepime [Susceptibility] by Minimum inhibitory concentration (MIC)</td></tr><tr><td><a href="https://loinc.org/108-1/">108-1</a></td><td>Cefotaxime [Susceptibility] by Minimum inhibitory concentration (MIC)</td></tr><tr><td><a href="https://loinc.org/112-3/">112-3</a></td><td>Cefotetan [Susceptibility] by Minimum inhibitory concentration (MIC)</td></tr><tr><td><a href="https://loinc.org/116-4/">116-4</a></td><td>Cefoxitin [Susceptibility] by Minimum inhibitory concentration (MIC)</td></tr><tr><td><a href="https://loinc.org/133-9/">133-9</a></td><td>Ceftazidime [Susceptibility] by Minimum inhibitory concentration (MIC)</td></tr><tr><td><a href="https://loinc.org/141-2/">141-2</a></td><td>Ceftriaxone [Susceptibility] by Minimum inhibitory concentration (MIC)</td></tr><tr><td><a href="https://loinc.org/145-3/">145-3</a></td><td>Cefuroxime Parenteral [Susceptibility] by Minimum inhibitory concentration (MIC)</td></tr><tr><td><a href="https://loinc.org/161-0/">161-0</a></td><td>Cephalothin [Susceptibility] by Minimum inhibitory concentration (MIC)</td></tr><tr><td><a href="https://loinc.org/173-5/">173-5</a></td><td>Chloramphenicol [Susceptibility] by Minimum inhibitory concentration (MIC)</td></tr><tr><td><a href="https://loinc.org/185-9/">185-9</a></td><td>Ciprofloxacin [Susceptibility] by Minimum inhibitory concentration (MIC)</td></tr><tr><td><a href="https://loinc.org/193-3/">193-3</a></td><td>Clindamycin [Susceptibility] by Minimum inhibitory concentration (MIC)</td></tr><tr><td><a href="https://loinc.org/205-5/">205-5</a></td><td>Colistin [Susceptibility] by Minimum inhibitory concentration (MIC)</td></tr><tr><td><a href="https://loinc.org/35801-0/">35801-0</a></td><td>Ertapenem [Susceptibility] by Minimum inhibitory concentration (MIC)</td></tr><tr><td><a href="https://loinc.org/233-7/">233-7</a></td><td>Erythromycin [Susceptibility] by Minimum inhibitory concentration (MIC)</td></tr><tr><td><a href="https://loinc.org/25653-7/">25653-7</a></td><td>Fosfomycin [Susceptibility] by Minimum inhibitory concentration (MIC)</td></tr><tr><td><a href="https://loinc.org/262-6/">262-6</a></td><td>Fusidate [Susceptibility] by Minimum inhibitory concentration (MIC)</td></tr><tr><td><a href="https://loinc.org/267-5/">267-5</a></td><td>Gentamicin [Susceptibility] by Minimum inhibitory concentration (MIC)</td></tr><tr><td><a href="https://loinc.org/279-0/">279-0</a></td><td>Imipenem [Susceptibility] by Minimum inhibitory concentration (MIC)</td></tr><tr><td><a href="https://loinc.org/6652-2/">6652-2</a></td><td>Meropenem [Susceptibility] by Minimum inhibitory concentration (MIC)</td></tr><tr><td><a href="https://loinc.org/363-2/">363-2</a></td><td>Nitrofurantoin [Susceptibility] by Minimum inhibitory concentration (MIC)</td></tr><tr><td><a href="https://loinc.org/371-5/">371-5</a></td><td>Novobiocin [Susceptibility] by Minimum inhibitory concentration (MIC)</td></tr><tr><td><a href="https://loinc.org/383-0/">383-0</a></td><td>Oxacillin [Susceptibility] by Minimum inhibitory concentration (MIC)</td></tr><tr><td><a href="https://loinc.org/6932-8/">6932-8</a></td><td>Penicillin [Susceptibility] by Minimum inhibitory concentration (MIC)</td></tr><tr><td><a href="https://loinc.org/408-5/">408-5</a></td><td>Piperacillin [Susceptibility] by Minimum inhibitory concentration (MIC)</td></tr><tr><td><a href="https://loinc.org/412-7/">412-7</a></td><td>Piperacillin+Tazobactam [Susceptibility] by Minimum inhibitory concentration (MIC)</td></tr><tr><td><a href="https://loinc.org/496-0/">496-0</a></td><td>Tetracycline [Susceptibility] by Minimum inhibitory concentration (MIC)</td></tr><tr><td><a href="https://loinc.org/500-9/">500-9</a></td><td>Ticarcillin [Susceptibility] by Minimum inhibitory concentration (MIC)</td></tr><tr><td><a href="https://loinc.org/42355-8/">42355-8</a></td><td>Tigecycline [Susceptibility] by Minimum inhibitory concentration (MIC)</td></tr><tr><td><a href="https://loinc.org/508-2/">508-2</a></td><td>Tobramycin [Susceptibility] by Minimum inhibitory concentration (MIC)</td></tr><tr><td><a href="https://loinc.org/512-4/">512-4</a></td><td>Trimethoprim [Susceptibility] by Minimum inhibitory concentration (MIC)</td></tr><tr><td><a href="https://loinc.org/516-5/">516-5</a></td><td>Trimethoprim+Sulfamethoxazole [Susceptibility] by Minimum inhibitory concentration (MIC)</td></tr><tr><td><a href="https://loinc.org/524-9/">524-9</a></td><td>Vancomycin [Susceptibility] by Minimum inhibitory concentration (MIC)</td></tr></table></li></ul></div>
</text>
<url
value="http://bw.health.gov/fhir/amr/ValueSet/botswana-amr-antibiotic-susceptibility-loinc"/>
<version value="0.1.0"/>
<name value="BotswanaAMRAntibioticSusceptibilityLOINC"/>
<title value="Botswana AMR Antibiotic Susceptibility LOINC"/>
<status value="draft"/>
<date value="2026-03-13T21:27:21-04:00"/>
<publisher value="University of Botswana Partnership"/>
<contact>
<name value="University of Botswana Partnership"/>
<telecom>
<system value="url"/>
<value value="https://github.com/Dokotela/bw-amr-ig"/>
</telecom>
</contact>
<description
value="Collection of LOINC codes for antibiotic-susceptibility tests (MIC panel and individual drugs)"/>
<compose>
<include>
<system value="http://loinc.org"/>
<concept>
<code value="50545-3"/>
<display
value="Bacterial susceptibility panel by Minimum inhibitory concentration (MIC)"/>
</concept>
<concept>
<code value="12-5"/>
<display
value="Amikacin [Susceptibility] by Minimum inhibitory concentration (MIC)"/>
</concept>
<concept>
<code value="20-8"/>
<display
value="Amoxicillin+Clavulanate [Susceptibility] by Minimum inhibitory concentration (MIC)"/>
</concept>
<concept>
<code value="28-1"/>
<display
value="Ampicillin [Susceptibility] by Minimum inhibitory concentration (MIC)"/>
</concept>
<concept>
<code value="32-3"/>
<display
value="Ampicillin+Sulbactam [Susceptibility] by Minimum inhibitory concentration (MIC)"/>
</concept>
<concept>
<code value="36-4"/>
<display
value="Azithromycin [Susceptibility] by Minimum inhibitory concentration (MIC)"/>
</concept>
<concept>
<code value="44-8"/>
<display
value="Aztreonam [Susceptibility] by Minimum inhibitory concentration (MIC)"/>
</concept>
<concept>
<code value="76-0"/>
<display
value="Cefazolin [Susceptibility] by Minimum inhibitory concentration (MIC)"/>
</concept>
<concept>
<code value="6644-9"/>
<display
value="Cefepime [Susceptibility] by Minimum inhibitory concentration (MIC)"/>
</concept>
<concept>
<code value="108-1"/>
<display
value="Cefotaxime [Susceptibility] by Minimum inhibitory concentration (MIC)"/>
</concept>
<concept>
<code value="112-3"/>
<display
value="Cefotetan [Susceptibility] by Minimum inhibitory concentration (MIC)"/>
</concept>
<concept>
<code value="116-4"/>
<display
value="Cefoxitin [Susceptibility] by Minimum inhibitory concentration (MIC)"/>
</concept>
<concept>
<code value="133-9"/>
<display
value="Ceftazidime [Susceptibility] by Minimum inhibitory concentration (MIC)"/>
</concept>
<concept>
<code value="141-2"/>
<display
value="Ceftriaxone [Susceptibility] by Minimum inhibitory concentration (MIC)"/>
</concept>
<concept>
<code value="145-3"/>
<display
value="Cefuroxime Parenteral [Susceptibility] by Minimum inhibitory concentration (MIC)"/>
</concept>
<concept>
<code value="161-0"/>
<display
value="Cephalothin [Susceptibility] by Minimum inhibitory concentration (MIC)"/>
</concept>
<concept>
<code value="173-5"/>
<display
value="Chloramphenicol [Susceptibility] by Minimum inhibitory concentration (MIC)"/>
</concept>
<concept>
<code value="185-9"/>
<display
value="Ciprofloxacin [Susceptibility] by Minimum inhibitory concentration (MIC)"/>
</concept>
<concept>
<code value="193-3"/>
<display
value="Clindamycin [Susceptibility] by Minimum inhibitory concentration (MIC)"/>
</concept>
<concept>
<code value="205-5"/>
<display
value="Colistin [Susceptibility] by Minimum inhibitory concentration (MIC)"/>
</concept>
<concept>
<code value="35801-0"/>
<display
value="Ertapenem [Susceptibility] by Minimum inhibitory concentration (MIC)"/>
</concept>
<concept>
<code value="233-7"/>
<display
value="Erythromycin [Susceptibility] by Minimum inhibitory concentration (MIC)"/>
</concept>
<concept>
<code value="25653-7"/>
<display
value="Fosfomycin [Susceptibility] by Minimum inhibitory concentration (MIC)"/>
</concept>
<concept>
<code value="262-6"/>
<display
value="Fusidate [Susceptibility] by Minimum inhibitory concentration (MIC)"/>
</concept>
<concept>
<code value="267-5"/>
<display
value="Gentamicin [Susceptibility] by Minimum inhibitory concentration (MIC)"/>
</concept>
<concept>
<code value="279-0"/>
<display
value="Imipenem [Susceptibility] by Minimum inhibitory concentration (MIC)"/>
</concept>
<concept>
<code value="6652-2"/>
<display
value="Meropenem [Susceptibility] by Minimum inhibitory concentration (MIC)"/>
</concept>
<concept>
<code value="363-2"/>
<display
value="Nitrofurantoin [Susceptibility] by Minimum inhibitory concentration (MIC)"/>
</concept>
<concept>
<code value="371-5"/>
<display
value="Novobiocin [Susceptibility] by Minimum inhibitory concentration (MIC)"/>
</concept>
<concept>
<code value="383-0"/>
<display
value="Oxacillin [Susceptibility] by Minimum inhibitory concentration (MIC)"/>
</concept>
<concept>
<code value="6932-8"/>
<display
value="Penicillin [Susceptibility] by Minimum inhibitory concentration (MIC)"/>
</concept>
<concept>
<code value="408-5"/>
<display
value="Piperacillin [Susceptibility] by Minimum inhibitory concentration (MIC)"/>
</concept>
<concept>
<code value="412-7"/>
<display
value="Piperacillin+Tazobactam [Susceptibility] by Minimum inhibitory concentration (MIC)"/>
</concept>
<concept>
<code value="496-0"/>
<display
value="Tetracycline [Susceptibility] by Minimum inhibitory concentration (MIC)"/>
</concept>
<concept>
<code value="500-9"/>
<display
value="Ticarcillin [Susceptibility] by Minimum inhibitory concentration (MIC)"/>
</concept>
<concept>
<code value="42355-8"/>
<display
value="Tigecycline [Susceptibility] by Minimum inhibitory concentration (MIC)"/>
</concept>
<concept>
<code value="508-2"/>
<display
value="Tobramycin [Susceptibility] by Minimum inhibitory concentration (MIC)"/>
</concept>
<concept>
<code value="512-4"/>
<display
value="Trimethoprim [Susceptibility] by Minimum inhibitory concentration (MIC)"/>
</concept>
<concept>
<code value="516-5"/>
<display
value="Trimethoprim+Sulfamethoxazole [Susceptibility] by Minimum inhibitory concentration (MIC)"/>
</concept>
<concept>
<code value="524-9"/>
<display
value="Vancomycin [Susceptibility] by Minimum inhibitory concentration (MIC)"/>
</concept>
</include>
</compose>
</ValueSet>