Botswana AMR Implementation Guide
0.1.0 - 0.1.0

Botswana AMR Implementation Guide - Local Development build (v0.1.0) built by the FHIR (HL7® FHIR® Standard) Build Tools. See the Directory of published versions

: Botswana AMR Antibiotic Susceptibility LOINC - TTL Representation

Draft as of 2026-03-13

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@prefix fhir: <http://hl7.org/fhir/> .
@prefix owl: <http://www.w3.org/2002/07/owl#> .
@prefix rdf: <http://www.w3.org/1999/02/22-rdf-syntax-ns#> .
@prefix rdfs: <http://www.w3.org/2000/01/rdf-schema#> .
@prefix xsd: <http://www.w3.org/2001/XMLSchema#> .

# - resource -------------------------------------------------------------------

 a fhir:ValueSet ;
  fhir:nodeRole fhir:treeRoot ;
  fhir:id [ fhir:v "botswana-amr-antibiotic-susceptibility-loinc"] ; # 
  fhir:text [
fhir:status [ fhir:v "generated" ] ;
fhir:div [ fhir:v "<div xmlns=\"http://www.w3.org/1999/xhtml\"><p class=\"res-header-id\"><b>Generated Narrative: ValueSet botswana-amr-antibiotic-susceptibility-loinc</b></p><a name=\"botswana-amr-antibiotic-susceptibility-loinc\"> </a><a name=\"hcbotswana-amr-antibiotic-susceptibility-loinc\"> </a><ul><li>Include these codes as defined in <a href=\"http://loinc.org\"><code>http://loinc.org</code></a><span title=\"Version is not explicitly stated. No matching Code System found\"> version Not Stated (use latest from terminology server)</span><table class=\"none\"><tr><td style=\"white-space:nowrap\"><b>Code</b></td><td><b>Display</b></td></tr><tr><td><a href=\"https://loinc.org/50545-3/\">50545-3</a></td><td>Bacterial susceptibility panel by Minimum inhibitory concentration (MIC)</td></tr><tr><td><a href=\"https://loinc.org/12-5/\">12-5</a></td><td>Amikacin [Susceptibility] by Minimum inhibitory concentration (MIC)</td></tr><tr><td><a href=\"https://loinc.org/20-8/\">20-8</a></td><td>Amoxicillin+Clavulanate [Susceptibility] by Minimum inhibitory concentration (MIC)</td></tr><tr><td><a href=\"https://loinc.org/28-1/\">28-1</a></td><td>Ampicillin [Susceptibility] by Minimum inhibitory concentration (MIC)</td></tr><tr><td><a href=\"https://loinc.org/32-3/\">32-3</a></td><td>Ampicillin+Sulbactam [Susceptibility] by Minimum inhibitory concentration (MIC)</td></tr><tr><td><a href=\"https://loinc.org/36-4/\">36-4</a></td><td>Azithromycin [Susceptibility] by Minimum inhibitory concentration (MIC)</td></tr><tr><td><a href=\"https://loinc.org/44-8/\">44-8</a></td><td>Aztreonam [Susceptibility] by Minimum inhibitory concentration (MIC)</td></tr><tr><td><a href=\"https://loinc.org/76-0/\">76-0</a></td><td>Cefazolin [Susceptibility] by Minimum inhibitory concentration (MIC)</td></tr><tr><td><a href=\"https://loinc.org/6644-9/\">6644-9</a></td><td>Cefepime [Susceptibility] by Minimum inhibitory concentration (MIC)</td></tr><tr><td><a href=\"https://loinc.org/108-1/\">108-1</a></td><td>Cefotaxime [Susceptibility] by Minimum inhibitory concentration (MIC)</td></tr><tr><td><a href=\"https://loinc.org/112-3/\">112-3</a></td><td>Cefotetan [Susceptibility] by Minimum inhibitory concentration (MIC)</td></tr><tr><td><a href=\"https://loinc.org/116-4/\">116-4</a></td><td>Cefoxitin [Susceptibility] by Minimum inhibitory concentration (MIC)</td></tr><tr><td><a href=\"https://loinc.org/133-9/\">133-9</a></td><td>Ceftazidime [Susceptibility] by Minimum inhibitory concentration (MIC)</td></tr><tr><td><a href=\"https://loinc.org/141-2/\">141-2</a></td><td>Ceftriaxone [Susceptibility] by Minimum inhibitory concentration (MIC)</td></tr><tr><td><a href=\"https://loinc.org/145-3/\">145-3</a></td><td>Cefuroxime Parenteral [Susceptibility] by Minimum inhibitory concentration (MIC)</td></tr><tr><td><a href=\"https://loinc.org/161-0/\">161-0</a></td><td>Cephalothin [Susceptibility] by Minimum inhibitory concentration (MIC)</td></tr><tr><td><a href=\"https://loinc.org/173-5/\">173-5</a></td><td>Chloramphenicol [Susceptibility] by Minimum inhibitory concentration (MIC)</td></tr><tr><td><a href=\"https://loinc.org/185-9/\">185-9</a></td><td>Ciprofloxacin [Susceptibility] by Minimum inhibitory concentration (MIC)</td></tr><tr><td><a href=\"https://loinc.org/193-3/\">193-3</a></td><td>Clindamycin [Susceptibility] by Minimum inhibitory concentration (MIC)</td></tr><tr><td><a href=\"https://loinc.org/205-5/\">205-5</a></td><td>Colistin [Susceptibility] by Minimum inhibitory concentration (MIC)</td></tr><tr><td><a href=\"https://loinc.org/35801-0/\">35801-0</a></td><td>Ertapenem [Susceptibility] by Minimum inhibitory concentration (MIC)</td></tr><tr><td><a href=\"https://loinc.org/233-7/\">233-7</a></td><td>Erythromycin [Susceptibility] by Minimum inhibitory concentration (MIC)</td></tr><tr><td><a href=\"https://loinc.org/25653-7/\">25653-7</a></td><td>Fosfomycin [Susceptibility] by Minimum inhibitory concentration (MIC)</td></tr><tr><td><a href=\"https://loinc.org/262-6/\">262-6</a></td><td>Fusidate [Susceptibility] by Minimum inhibitory concentration (MIC)</td></tr><tr><td><a href=\"https://loinc.org/267-5/\">267-5</a></td><td>Gentamicin [Susceptibility] by Minimum inhibitory concentration (MIC)</td></tr><tr><td><a href=\"https://loinc.org/279-0/\">279-0</a></td><td>Imipenem [Susceptibility] by Minimum inhibitory concentration (MIC)</td></tr><tr><td><a href=\"https://loinc.org/6652-2/\">6652-2</a></td><td>Meropenem [Susceptibility] by Minimum inhibitory concentration (MIC)</td></tr><tr><td><a href=\"https://loinc.org/363-2/\">363-2</a></td><td>Nitrofurantoin [Susceptibility] by Minimum inhibitory concentration (MIC)</td></tr><tr><td><a href=\"https://loinc.org/371-5/\">371-5</a></td><td>Novobiocin [Susceptibility] by Minimum inhibitory concentration (MIC)</td></tr><tr><td><a href=\"https://loinc.org/383-0/\">383-0</a></td><td>Oxacillin [Susceptibility] by Minimum inhibitory concentration (MIC)</td></tr><tr><td><a href=\"https://loinc.org/6932-8/\">6932-8</a></td><td>Penicillin [Susceptibility] by Minimum inhibitory concentration (MIC)</td></tr><tr><td><a href=\"https://loinc.org/408-5/\">408-5</a></td><td>Piperacillin [Susceptibility] by Minimum inhibitory concentration (MIC)</td></tr><tr><td><a href=\"https://loinc.org/412-7/\">412-7</a></td><td>Piperacillin+Tazobactam [Susceptibility] by Minimum inhibitory concentration (MIC)</td></tr><tr><td><a href=\"https://loinc.org/496-0/\">496-0</a></td><td>Tetracycline [Susceptibility] by Minimum inhibitory concentration (MIC)</td></tr><tr><td><a href=\"https://loinc.org/500-9/\">500-9</a></td><td>Ticarcillin [Susceptibility] by Minimum inhibitory concentration (MIC)</td></tr><tr><td><a href=\"https://loinc.org/42355-8/\">42355-8</a></td><td>Tigecycline [Susceptibility] by Minimum inhibitory concentration (MIC)</td></tr><tr><td><a href=\"https://loinc.org/508-2/\">508-2</a></td><td>Tobramycin [Susceptibility] by Minimum inhibitory concentration (MIC)</td></tr><tr><td><a href=\"https://loinc.org/512-4/\">512-4</a></td><td>Trimethoprim [Susceptibility] by Minimum inhibitory concentration (MIC)</td></tr><tr><td><a href=\"https://loinc.org/516-5/\">516-5</a></td><td>Trimethoprim+Sulfamethoxazole [Susceptibility] by Minimum inhibitory concentration (MIC)</td></tr><tr><td><a href=\"https://loinc.org/524-9/\">524-9</a></td><td>Vancomycin [Susceptibility] by Minimum inhibitory concentration (MIC)</td></tr></table></li></ul></div>"^^rdf:XMLLiteral ]
  ] ; # 
  fhir:url [
fhir:v "http://bw.health.gov/fhir/amr/ValueSet/botswana-amr-antibiotic-susceptibility-loinc"^^xsd:anyURI ;
fhir:l <http://bw.health.gov/fhir/amr/ValueSet/botswana-amr-antibiotic-susceptibility-loinc>
  ] ; # 
  fhir:version [ fhir:v "0.1.0"] ; # 
  fhir:name [ fhir:v "BotswanaAMRAntibioticSusceptibilityLOINC"] ; # 
  fhir:title [ fhir:v "Botswana AMR Antibiotic Susceptibility LOINC"] ; # 
  fhir:status [ fhir:v "draft"] ; # 
  fhir:date [ fhir:v "2026-03-13T21:27:21-04:00"^^xsd:dateTime] ; # 
  fhir:publisher [ fhir:v "University of Botswana Partnership"] ; # 
  fhir:contact ( [
fhir:name [ fhir:v "University of Botswana Partnership" ] ;
    ( fhir:telecom [
fhir:system [ fhir:v "url" ] ;
fhir:value [ fhir:v "https://github.com/Dokotela/bw-amr-ig" ]     ] )
  ] ) ; # 
  fhir:description [ fhir:v "Collection of LOINC codes for antibiotic-susceptibility tests (MIC panel and individual drugs)"] ; # 
  fhir:compose [
    ( fhir:include [
fhir:system [
fhir:v "http://loinc.org"^^xsd:anyURI ;
fhir:l <http://loinc.org>       ] ;
      ( fhir:concept [
fhir:code [ fhir:v "50545-3" ] ;
fhir:display [ fhir:v "Bacterial susceptibility panel by Minimum inhibitory concentration (MIC)" ]       ] [
fhir:code [ fhir:v "12-5" ] ;
fhir:display [ fhir:v "Amikacin [Susceptibility] by Minimum inhibitory concentration (MIC)" ]       ] [
fhir:code [ fhir:v "20-8" ] ;
fhir:display [ fhir:v "Amoxicillin+Clavulanate [Susceptibility] by Minimum inhibitory concentration (MIC)" ]       ] [
fhir:code [ fhir:v "28-1" ] ;
fhir:display [ fhir:v "Ampicillin [Susceptibility] by Minimum inhibitory concentration (MIC)" ]       ] [
fhir:code [ fhir:v "32-3" ] ;
fhir:display [ fhir:v "Ampicillin+Sulbactam [Susceptibility] by Minimum inhibitory concentration (MIC)" ]       ] [
fhir:code [ fhir:v "36-4" ] ;
fhir:display [ fhir:v "Azithromycin [Susceptibility] by Minimum inhibitory concentration (MIC)" ]       ] [
fhir:code [ fhir:v "44-8" ] ;
fhir:display [ fhir:v "Aztreonam [Susceptibility] by Minimum inhibitory concentration (MIC)" ]       ] [
fhir:code [ fhir:v "76-0" ] ;
fhir:display [ fhir:v "Cefazolin [Susceptibility] by Minimum inhibitory concentration (MIC)" ]       ] [
fhir:code [ fhir:v "6644-9" ] ;
fhir:display [ fhir:v "Cefepime [Susceptibility] by Minimum inhibitory concentration (MIC)" ]       ] [
fhir:code [ fhir:v "108-1" ] ;
fhir:display [ fhir:v "Cefotaxime [Susceptibility] by Minimum inhibitory concentration (MIC)" ]       ] [
fhir:code [ fhir:v "112-3" ] ;
fhir:display [ fhir:v "Cefotetan [Susceptibility] by Minimum inhibitory concentration (MIC)" ]       ] [
fhir:code [ fhir:v "116-4" ] ;
fhir:display [ fhir:v "Cefoxitin [Susceptibility] by Minimum inhibitory concentration (MIC)" ]       ] [
fhir:code [ fhir:v "133-9" ] ;
fhir:display [ fhir:v "Ceftazidime [Susceptibility] by Minimum inhibitory concentration (MIC)" ]       ] [
fhir:code [ fhir:v "141-2" ] ;
fhir:display [ fhir:v "Ceftriaxone [Susceptibility] by Minimum inhibitory concentration (MIC)" ]       ] [
fhir:code [ fhir:v "145-3" ] ;
fhir:display [ fhir:v "Cefuroxime Parenteral [Susceptibility] by Minimum inhibitory concentration (MIC)" ]       ] [
fhir:code [ fhir:v "161-0" ] ;
fhir:display [ fhir:v "Cephalothin [Susceptibility] by Minimum inhibitory concentration (MIC)" ]       ] [
fhir:code [ fhir:v "173-5" ] ;
fhir:display [ fhir:v "Chloramphenicol [Susceptibility] by Minimum inhibitory concentration (MIC)" ]       ] [
fhir:code [ fhir:v "185-9" ] ;
fhir:display [ fhir:v "Ciprofloxacin [Susceptibility] by Minimum inhibitory concentration (MIC)" ]       ] [
fhir:code [ fhir:v "193-3" ] ;
fhir:display [ fhir:v "Clindamycin [Susceptibility] by Minimum inhibitory concentration (MIC)" ]       ] [
fhir:code [ fhir:v "205-5" ] ;
fhir:display [ fhir:v "Colistin [Susceptibility] by Minimum inhibitory concentration (MIC)" ]       ] [
fhir:code [ fhir:v "35801-0" ] ;
fhir:display [ fhir:v "Ertapenem [Susceptibility] by Minimum inhibitory concentration (MIC)" ]       ] [
fhir:code [ fhir:v "233-7" ] ;
fhir:display [ fhir:v "Erythromycin [Susceptibility] by Minimum inhibitory concentration (MIC)" ]       ] [
fhir:code [ fhir:v "25653-7" ] ;
fhir:display [ fhir:v "Fosfomycin [Susceptibility] by Minimum inhibitory concentration (MIC)" ]       ] [
fhir:code [ fhir:v "262-6" ] ;
fhir:display [ fhir:v "Fusidate [Susceptibility] by Minimum inhibitory concentration (MIC)" ]       ] [
fhir:code [ fhir:v "267-5" ] ;
fhir:display [ fhir:v "Gentamicin [Susceptibility] by Minimum inhibitory concentration (MIC)" ]       ] [
fhir:code [ fhir:v "279-0" ] ;
fhir:display [ fhir:v "Imipenem [Susceptibility] by Minimum inhibitory concentration (MIC)" ]       ] [
fhir:code [ fhir:v "6652-2" ] ;
fhir:display [ fhir:v "Meropenem [Susceptibility] by Minimum inhibitory concentration (MIC)" ]       ] [
fhir:code [ fhir:v "363-2" ] ;
fhir:display [ fhir:v "Nitrofurantoin [Susceptibility] by Minimum inhibitory concentration (MIC)" ]       ] [
fhir:code [ fhir:v "371-5" ] ;
fhir:display [ fhir:v "Novobiocin [Susceptibility] by Minimum inhibitory concentration (MIC)" ]       ] [
fhir:code [ fhir:v "383-0" ] ;
fhir:display [ fhir:v "Oxacillin [Susceptibility] by Minimum inhibitory concentration (MIC)" ]       ] [
fhir:code [ fhir:v "6932-8" ] ;
fhir:display [ fhir:v "Penicillin [Susceptibility] by Minimum inhibitory concentration (MIC)" ]       ] [
fhir:code [ fhir:v "408-5" ] ;
fhir:display [ fhir:v "Piperacillin [Susceptibility] by Minimum inhibitory concentration (MIC)" ]       ] [
fhir:code [ fhir:v "412-7" ] ;
fhir:display [ fhir:v "Piperacillin+Tazobactam [Susceptibility] by Minimum inhibitory concentration (MIC)" ]       ] [
fhir:code [ fhir:v "496-0" ] ;
fhir:display [ fhir:v "Tetracycline [Susceptibility] by Minimum inhibitory concentration (MIC)" ]       ] [
fhir:code [ fhir:v "500-9" ] ;
fhir:display [ fhir:v "Ticarcillin [Susceptibility] by Minimum inhibitory concentration (MIC)" ]       ] [
fhir:code [ fhir:v "42355-8" ] ;
fhir:display [ fhir:v "Tigecycline [Susceptibility] by Minimum inhibitory concentration (MIC)" ]       ] [
fhir:code [ fhir:v "508-2" ] ;
fhir:display [ fhir:v "Tobramycin [Susceptibility] by Minimum inhibitory concentration (MIC)" ]       ] [
fhir:code [ fhir:v "512-4" ] ;
fhir:display [ fhir:v "Trimethoprim [Susceptibility] by Minimum inhibitory concentration (MIC)" ]       ] [
fhir:code [ fhir:v "516-5" ] ;
fhir:display [ fhir:v "Trimethoprim+Sulfamethoxazole [Susceptibility] by Minimum inhibitory concentration (MIC)" ]       ] [
fhir:code [ fhir:v "524-9" ] ;
fhir:display [ fhir:v "Vancomycin [Susceptibility] by Minimum inhibitory concentration (MIC)" ]       ] )     ] )
  ] . #