Botswana AMR Implementation Guide
0.1.0 - 0.1.0
Botswana AMR Implementation Guide - Local Development build (v0.1.0) built by the FHIR (HL7® FHIR® Standard) Build Tools. See the Directory of published versions
| Draft as of 2026-03-13 |
{
"resourceType" : "ValueSet",
"id" : "botswana-amr-antibiotic-susceptibility-loinc",
"text" : {
"status" : "generated",
"div" : "<div xmlns=\"http://www.w3.org/1999/xhtml\"><p class=\"res-header-id\"><b>Generated Narrative: ValueSet botswana-amr-antibiotic-susceptibility-loinc</b></p><a name=\"botswana-amr-antibiotic-susceptibility-loinc\"> </a><a name=\"hcbotswana-amr-antibiotic-susceptibility-loinc\"> </a><ul><li>Include these codes as defined in <a href=\"http://loinc.org\"><code>http://loinc.org</code></a><span title=\"Version is not explicitly stated. No matching Code System found\"> version Not Stated (use latest from terminology server)</span><table class=\"none\"><tr><td style=\"white-space:nowrap\"><b>Code</b></td><td><b>Display</b></td></tr><tr><td><a href=\"https://loinc.org/50545-3/\">50545-3</a></td><td>Bacterial susceptibility panel by Minimum inhibitory concentration (MIC)</td></tr><tr><td><a href=\"https://loinc.org/12-5/\">12-5</a></td><td>Amikacin [Susceptibility] by Minimum inhibitory concentration (MIC)</td></tr><tr><td><a href=\"https://loinc.org/20-8/\">20-8</a></td><td>Amoxicillin+Clavulanate [Susceptibility] by Minimum inhibitory concentration (MIC)</td></tr><tr><td><a href=\"https://loinc.org/28-1/\">28-1</a></td><td>Ampicillin [Susceptibility] by Minimum inhibitory concentration (MIC)</td></tr><tr><td><a href=\"https://loinc.org/32-3/\">32-3</a></td><td>Ampicillin+Sulbactam [Susceptibility] by Minimum inhibitory concentration (MIC)</td></tr><tr><td><a href=\"https://loinc.org/36-4/\">36-4</a></td><td>Azithromycin [Susceptibility] by Minimum inhibitory concentration (MIC)</td></tr><tr><td><a href=\"https://loinc.org/44-8/\">44-8</a></td><td>Aztreonam [Susceptibility] by Minimum inhibitory concentration (MIC)</td></tr><tr><td><a href=\"https://loinc.org/76-0/\">76-0</a></td><td>Cefazolin [Susceptibility] by Minimum inhibitory concentration (MIC)</td></tr><tr><td><a href=\"https://loinc.org/6644-9/\">6644-9</a></td><td>Cefepime [Susceptibility] by Minimum inhibitory concentration (MIC)</td></tr><tr><td><a href=\"https://loinc.org/108-1/\">108-1</a></td><td>Cefotaxime [Susceptibility] by Minimum inhibitory concentration (MIC)</td></tr><tr><td><a href=\"https://loinc.org/112-3/\">112-3</a></td><td>Cefotetan [Susceptibility] by Minimum inhibitory concentration (MIC)</td></tr><tr><td><a href=\"https://loinc.org/116-4/\">116-4</a></td><td>Cefoxitin [Susceptibility] by Minimum inhibitory concentration (MIC)</td></tr><tr><td><a href=\"https://loinc.org/133-9/\">133-9</a></td><td>Ceftazidime [Susceptibility] by Minimum inhibitory concentration (MIC)</td></tr><tr><td><a href=\"https://loinc.org/141-2/\">141-2</a></td><td>Ceftriaxone [Susceptibility] by Minimum inhibitory concentration (MIC)</td></tr><tr><td><a href=\"https://loinc.org/145-3/\">145-3</a></td><td>Cefuroxime Parenteral [Susceptibility] by Minimum inhibitory concentration (MIC)</td></tr><tr><td><a href=\"https://loinc.org/161-0/\">161-0</a></td><td>Cephalothin [Susceptibility] by Minimum inhibitory concentration (MIC)</td></tr><tr><td><a href=\"https://loinc.org/173-5/\">173-5</a></td><td>Chloramphenicol [Susceptibility] by Minimum inhibitory concentration (MIC)</td></tr><tr><td><a href=\"https://loinc.org/185-9/\">185-9</a></td><td>Ciprofloxacin [Susceptibility] by Minimum inhibitory concentration (MIC)</td></tr><tr><td><a href=\"https://loinc.org/193-3/\">193-3</a></td><td>Clindamycin [Susceptibility] by Minimum inhibitory concentration (MIC)</td></tr><tr><td><a href=\"https://loinc.org/205-5/\">205-5</a></td><td>Colistin [Susceptibility] by Minimum inhibitory concentration (MIC)</td></tr><tr><td><a href=\"https://loinc.org/35801-0/\">35801-0</a></td><td>Ertapenem [Susceptibility] by Minimum inhibitory concentration (MIC)</td></tr><tr><td><a href=\"https://loinc.org/233-7/\">233-7</a></td><td>Erythromycin [Susceptibility] by Minimum inhibitory concentration (MIC)</td></tr><tr><td><a href=\"https://loinc.org/25653-7/\">25653-7</a></td><td>Fosfomycin [Susceptibility] by Minimum inhibitory concentration (MIC)</td></tr><tr><td><a href=\"https://loinc.org/262-6/\">262-6</a></td><td>Fusidate [Susceptibility] by Minimum inhibitory concentration (MIC)</td></tr><tr><td><a href=\"https://loinc.org/267-5/\">267-5</a></td><td>Gentamicin [Susceptibility] by Minimum inhibitory concentration (MIC)</td></tr><tr><td><a href=\"https://loinc.org/279-0/\">279-0</a></td><td>Imipenem [Susceptibility] by Minimum inhibitory concentration (MIC)</td></tr><tr><td><a href=\"https://loinc.org/6652-2/\">6652-2</a></td><td>Meropenem [Susceptibility] by Minimum inhibitory concentration (MIC)</td></tr><tr><td><a href=\"https://loinc.org/363-2/\">363-2</a></td><td>Nitrofurantoin [Susceptibility] by Minimum inhibitory concentration (MIC)</td></tr><tr><td><a href=\"https://loinc.org/371-5/\">371-5</a></td><td>Novobiocin [Susceptibility] by Minimum inhibitory concentration (MIC)</td></tr><tr><td><a href=\"https://loinc.org/383-0/\">383-0</a></td><td>Oxacillin [Susceptibility] by Minimum inhibitory concentration (MIC)</td></tr><tr><td><a href=\"https://loinc.org/6932-8/\">6932-8</a></td><td>Penicillin [Susceptibility] by Minimum inhibitory concentration (MIC)</td></tr><tr><td><a href=\"https://loinc.org/408-5/\">408-5</a></td><td>Piperacillin [Susceptibility] by Minimum inhibitory concentration (MIC)</td></tr><tr><td><a href=\"https://loinc.org/412-7/\">412-7</a></td><td>Piperacillin+Tazobactam [Susceptibility] by Minimum inhibitory concentration (MIC)</td></tr><tr><td><a href=\"https://loinc.org/496-0/\">496-0</a></td><td>Tetracycline [Susceptibility] by Minimum inhibitory concentration (MIC)</td></tr><tr><td><a href=\"https://loinc.org/500-9/\">500-9</a></td><td>Ticarcillin [Susceptibility] by Minimum inhibitory concentration (MIC)</td></tr><tr><td><a href=\"https://loinc.org/42355-8/\">42355-8</a></td><td>Tigecycline [Susceptibility] by Minimum inhibitory concentration (MIC)</td></tr><tr><td><a href=\"https://loinc.org/508-2/\">508-2</a></td><td>Tobramycin [Susceptibility] by Minimum inhibitory concentration (MIC)</td></tr><tr><td><a href=\"https://loinc.org/512-4/\">512-4</a></td><td>Trimethoprim [Susceptibility] by Minimum inhibitory concentration (MIC)</td></tr><tr><td><a href=\"https://loinc.org/516-5/\">516-5</a></td><td>Trimethoprim+Sulfamethoxazole [Susceptibility] by Minimum inhibitory concentration (MIC)</td></tr><tr><td><a href=\"https://loinc.org/524-9/\">524-9</a></td><td>Vancomycin [Susceptibility] by Minimum inhibitory concentration (MIC)</td></tr></table></li></ul></div>"
},
"url" : "http://bw.health.gov/fhir/amr/ValueSet/botswana-amr-antibiotic-susceptibility-loinc",
"version" : "0.1.0",
"name" : "BotswanaAMRAntibioticSusceptibilityLOINC",
"title" : "Botswana AMR Antibiotic Susceptibility LOINC",
"status" : "draft",
"date" : "2026-03-13T21:27:21-04:00",
"publisher" : "University of Botswana Partnership",
"contact" : [
{
"name" : "University of Botswana Partnership",
"telecom" : [
{
"system" : "url",
"value" : "https://github.com/Dokotela/bw-amr-ig"
}
]
}
],
"description" : "Collection of LOINC codes for antibiotic-susceptibility tests (MIC panel and individual drugs)",
"compose" : {
"include" : [
{
"system" : "http://loinc.org",
"concept" : [
{
"code" : "50545-3",
"display" : "Bacterial susceptibility panel by Minimum inhibitory concentration (MIC)"
},
{
"code" : "12-5",
"display" : "Amikacin [Susceptibility] by Minimum inhibitory concentration (MIC)"
},
{
"code" : "20-8",
"display" : "Amoxicillin+Clavulanate [Susceptibility] by Minimum inhibitory concentration (MIC)"
},
{
"code" : "28-1",
"display" : "Ampicillin [Susceptibility] by Minimum inhibitory concentration (MIC)"
},
{
"code" : "32-3",
"display" : "Ampicillin+Sulbactam [Susceptibility] by Minimum inhibitory concentration (MIC)"
},
{
"code" : "36-4",
"display" : "Azithromycin [Susceptibility] by Minimum inhibitory concentration (MIC)"
},
{
"code" : "44-8",
"display" : "Aztreonam [Susceptibility] by Minimum inhibitory concentration (MIC)"
},
{
"code" : "76-0",
"display" : "Cefazolin [Susceptibility] by Minimum inhibitory concentration (MIC)"
},
{
"code" : "6644-9",
"display" : "Cefepime [Susceptibility] by Minimum inhibitory concentration (MIC)"
},
{
"code" : "108-1",
"display" : "Cefotaxime [Susceptibility] by Minimum inhibitory concentration (MIC)"
},
{
"code" : "112-3",
"display" : "Cefotetan [Susceptibility] by Minimum inhibitory concentration (MIC)"
},
{
"code" : "116-4",
"display" : "Cefoxitin [Susceptibility] by Minimum inhibitory concentration (MIC)"
},
{
"code" : "133-9",
"display" : "Ceftazidime [Susceptibility] by Minimum inhibitory concentration (MIC)"
},
{
"code" : "141-2",
"display" : "Ceftriaxone [Susceptibility] by Minimum inhibitory concentration (MIC)"
},
{
"code" : "145-3",
"display" : "Cefuroxime Parenteral [Susceptibility] by Minimum inhibitory concentration (MIC)"
},
{
"code" : "161-0",
"display" : "Cephalothin [Susceptibility] by Minimum inhibitory concentration (MIC)"
},
{
"code" : "173-5",
"display" : "Chloramphenicol [Susceptibility] by Minimum inhibitory concentration (MIC)"
},
{
"code" : "185-9",
"display" : "Ciprofloxacin [Susceptibility] by Minimum inhibitory concentration (MIC)"
},
{
"code" : "193-3",
"display" : "Clindamycin [Susceptibility] by Minimum inhibitory concentration (MIC)"
},
{
"code" : "205-5",
"display" : "Colistin [Susceptibility] by Minimum inhibitory concentration (MIC)"
},
{
"code" : "35801-0",
"display" : "Ertapenem [Susceptibility] by Minimum inhibitory concentration (MIC)"
},
{
"code" : "233-7",
"display" : "Erythromycin [Susceptibility] by Minimum inhibitory concentration (MIC)"
},
{
"code" : "25653-7",
"display" : "Fosfomycin [Susceptibility] by Minimum inhibitory concentration (MIC)"
},
{
"code" : "262-6",
"display" : "Fusidate [Susceptibility] by Minimum inhibitory concentration (MIC)"
},
{
"code" : "267-5",
"display" : "Gentamicin [Susceptibility] by Minimum inhibitory concentration (MIC)"
},
{
"code" : "279-0",
"display" : "Imipenem [Susceptibility] by Minimum inhibitory concentration (MIC)"
},
{
"code" : "6652-2",
"display" : "Meropenem [Susceptibility] by Minimum inhibitory concentration (MIC)"
},
{
"code" : "363-2",
"display" : "Nitrofurantoin [Susceptibility] by Minimum inhibitory concentration (MIC)"
},
{
"code" : "371-5",
"display" : "Novobiocin [Susceptibility] by Minimum inhibitory concentration (MIC)"
},
{
"code" : "383-0",
"display" : "Oxacillin [Susceptibility] by Minimum inhibitory concentration (MIC)"
},
{
"code" : "6932-8",
"display" : "Penicillin [Susceptibility] by Minimum inhibitory concentration (MIC)"
},
{
"code" : "408-5",
"display" : "Piperacillin [Susceptibility] by Minimum inhibitory concentration (MIC)"
},
{
"code" : "412-7",
"display" : "Piperacillin+Tazobactam [Susceptibility] by Minimum inhibitory concentration (MIC)"
},
{
"code" : "496-0",
"display" : "Tetracycline [Susceptibility] by Minimum inhibitory concentration (MIC)"
},
{
"code" : "500-9",
"display" : "Ticarcillin [Susceptibility] by Minimum inhibitory concentration (MIC)"
},
{
"code" : "42355-8",
"display" : "Tigecycline [Susceptibility] by Minimum inhibitory concentration (MIC)"
},
{
"code" : "508-2",
"display" : "Tobramycin [Susceptibility] by Minimum inhibitory concentration (MIC)"
},
{
"code" : "512-4",
"display" : "Trimethoprim [Susceptibility] by Minimum inhibitory concentration (MIC)"
},
{
"code" : "516-5",
"display" : "Trimethoprim+Sulfamethoxazole [Susceptibility] by Minimum inhibitory concentration (MIC)"
},
{
"code" : "524-9",
"display" : "Vancomycin [Susceptibility] by Minimum inhibitory concentration (MIC)"
}
]
}
]
}
}