Botswana AMR Implementation Guide
0.1.0 - 0.1.0

Botswana AMR Implementation Guide - Local Development build (v0.1.0) built by the FHIR (HL7® FHIR® Standard) Build Tools. See the Directory of published versions

: Botswana AMR Specimen Collection Sites - XML Representation

Draft as of 2026-03-13

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<ValueSet xmlns="http://hl7.org/fhir">
  <id value="botswana-amr-specimen-site-vs"/>
  <text>
    <status value="generated"/>
    <div xmlns="http://www.w3.org/1999/xhtml"><p class="res-header-id"><b>Generated Narrative: ValueSet botswana-amr-specimen-site-vs</b></p><a name="botswana-amr-specimen-site-vs"> </a><a name="hcbotswana-amr-specimen-site-vs"> </a><ul><li>Include these codes as defined in <a href="http://www.snomed.org/"><code>http://snomed.info/sct</code></a><span title="Version is not explicitly stated. No matching Code System found"> version Not Stated (use latest from terminology server)</span><table class="none"><tr><td style="white-space:nowrap"><b>Code</b></td><td><b>Display</b></td></tr><tr><td><a href="http://snomed.info/id/87612001">87612001</a></td><td>Blood</td></tr><tr><td><a href="http://snomed.info/id/68171009">68171009</a></td><td>Urine</td></tr><tr><td><a href="http://snomed.info/id/119334006">119334006</a></td><td>Sputum specimen</td></tr><tr><td><a href="http://snomed.info/id/258580003">258580003</a></td><td>Wound</td></tr><tr><td><a href="http://snomed.info/id/69695003">69695003</a></td><td>Cerebrospinal fluid</td></tr><tr><td><a href="http://snomed.info/id/119339001">119339001</a></td><td>Stool specimen</td></tr><tr><td><a href="http://snomed.info/id/321667001">321667001</a></td><td>Respiratory tract structure</td></tr><tr><td><a href="http://snomed.info/id/45206002">45206002</a></td><td>Nasal cavity structure</td></tr><tr><td><a href="http://snomed.info/id/123851003">123851003</a></td><td>Mouth region structure</td></tr><tr><td><a href="http://snomed.info/id/69536005">69536005</a></td><td>Head structure</td></tr><tr><td><a href="http://snomed.info/id/416775004">416775004</a></td><td>Throat structure</td></tr><tr><td><a href="http://snomed.info/id/76784001">76784001</a></td><td>Vaginal structure</td></tr><tr><td><a href="http://snomed.info/id/13648007">13648007</a></td><td>Urethral structure</td></tr><tr><td><a href="http://snomed.info/id/127949000">127949000</a></td><td>Catheter tip</td></tr><tr><td><a href="http://snomed.info/id/119376003">119376003</a></td><td>Tissue specimen</td></tr><tr><td><a href="http://snomed.info/id/74964007">74964007</a></td><td>Other</td></tr></table></li></ul></div>
  </text>
  <url
       value="http://bw.health.gov/fhir/amr/ValueSet/botswana-amr-specimen-site-vs"/>
  <version value="0.1.0"/>
  <name value="BotswanaAMRSpecimenSiteVS"/>
  <title value="Botswana AMR Specimen Collection Sites"/>
  <status value="draft"/>
  <date value="2026-03-13T21:27:21-04:00"/>
  <publisher value="University of Botswana Partnership"/>
  <contact>
    <name value="University of Botswana Partnership"/>
    <telecom>
      <system value="url"/>
      <value value="https://github.com/Dokotela/bw-amr-ig"/>
    </telecom>
  </contact>
  <description
               value="Anatomical sites where specimens are collected for Botswana AMR surveillance"/>
  <compose>
    <include>
      <system value="http://snomed.info/sct"/>
      <concept>
        <code value="87612001"/>
        <display value="Blood"/>
      </concept>
      <concept>
        <code value="68171009"/>
        <display value="Urine"/>
      </concept>
      <concept>
        <code value="119334006"/>
        <display value="Sputum specimen"/>
      </concept>
      <concept>
        <code value="258580003"/>
        <display value="Wound"/>
      </concept>
      <concept>
        <code value="69695003"/>
        <display value="Cerebrospinal fluid"/>
      </concept>
      <concept>
        <code value="119339001"/>
        <display value="Stool specimen"/>
      </concept>
      <concept>
        <code value="321667001"/>
        <display value="Respiratory tract structure"/>
      </concept>
      <concept>
        <code value="45206002"/>
        <display value="Nasal cavity structure"/>
      </concept>
      <concept>
        <code value="123851003"/>
        <display value="Mouth region structure"/>
      </concept>
      <concept>
        <code value="69536005"/>
        <display value="Head structure"/>
      </concept>
      <concept>
        <code value="416775004"/>
        <display value="Throat structure"/>
      </concept>
      <concept>
        <code value="76784001"/>
        <display value="Vaginal structure"/>
      </concept>
      <concept>
        <code value="13648007"/>
        <display value="Urethral structure"/>
      </concept>
      <concept>
        <code value="127949000"/>
        <display value="Catheter tip"/>
      </concept>
      <concept>
        <code value="119376003"/>
        <display value="Tissue specimen"/>
      </concept>
      <concept>
        <code value="74964007"/>
        <display value="Other"/>
      </concept>
    </include>
  </compose>
</ValueSet>