Botswana AMR Implementation Guide
0.1.0 - 0.1.0

Botswana AMR Implementation Guide - Local Development build (v0.1.0) built by the FHIR (HL7® FHIR® Standard) Build Tools. See the Directory of published versions

: Botswana AMR Specimen Collection Sites - JSON Representation

Draft as of 2026-03-13

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{
  "resourceType" : "ValueSet",
  "id" : "botswana-amr-specimen-site-vs",
  "text" : {
    "status" : "generated",
    "div" : "<div xmlns=\"http://www.w3.org/1999/xhtml\"><p class=\"res-header-id\"><b>Generated Narrative: ValueSet botswana-amr-specimen-site-vs</b></p><a name=\"botswana-amr-specimen-site-vs\"> </a><a name=\"hcbotswana-amr-specimen-site-vs\"> </a><ul><li>Include these codes as defined in <a href=\"http://www.snomed.org/\"><code>http://snomed.info/sct</code></a><span title=\"Version is not explicitly stated. No matching Code System found\"> version Not Stated (use latest from terminology server)</span><table class=\"none\"><tr><td style=\"white-space:nowrap\"><b>Code</b></td><td><b>Display</b></td></tr><tr><td><a href=\"http://snomed.info/id/87612001\">87612001</a></td><td>Blood</td></tr><tr><td><a href=\"http://snomed.info/id/68171009\">68171009</a></td><td>Urine</td></tr><tr><td><a href=\"http://snomed.info/id/119334006\">119334006</a></td><td>Sputum specimen</td></tr><tr><td><a href=\"http://snomed.info/id/258580003\">258580003</a></td><td>Wound</td></tr><tr><td><a href=\"http://snomed.info/id/69695003\">69695003</a></td><td>Cerebrospinal fluid</td></tr><tr><td><a href=\"http://snomed.info/id/119339001\">119339001</a></td><td>Stool specimen</td></tr><tr><td><a href=\"http://snomed.info/id/321667001\">321667001</a></td><td>Respiratory tract structure</td></tr><tr><td><a href=\"http://snomed.info/id/45206002\">45206002</a></td><td>Nasal cavity structure</td></tr><tr><td><a href=\"http://snomed.info/id/123851003\">123851003</a></td><td>Mouth region structure</td></tr><tr><td><a href=\"http://snomed.info/id/69536005\">69536005</a></td><td>Head structure</td></tr><tr><td><a href=\"http://snomed.info/id/416775004\">416775004</a></td><td>Throat structure</td></tr><tr><td><a href=\"http://snomed.info/id/76784001\">76784001</a></td><td>Vaginal structure</td></tr><tr><td><a href=\"http://snomed.info/id/13648007\">13648007</a></td><td>Urethral structure</td></tr><tr><td><a href=\"http://snomed.info/id/127949000\">127949000</a></td><td>Catheter tip</td></tr><tr><td><a href=\"http://snomed.info/id/119376003\">119376003</a></td><td>Tissue specimen</td></tr><tr><td><a href=\"http://snomed.info/id/74964007\">74964007</a></td><td>Other</td></tr></table></li></ul></div>"
  },
  "url" : "http://bw.health.gov/fhir/amr/ValueSet/botswana-amr-specimen-site-vs",
  "version" : "0.1.0",
  "name" : "BotswanaAMRSpecimenSiteVS",
  "title" : "Botswana AMR Specimen Collection Sites",
  "status" : "draft",
  "date" : "2026-03-13T21:27:21-04:00",
  "publisher" : "University of Botswana Partnership",
  "contact" : [
    {
      "name" : "University of Botswana Partnership",
      "telecom" : [
        {
          "system" : "url",
          "value" : "https://github.com/Dokotela/bw-amr-ig"
        }
      ]
    }
  ],
  "description" : "Anatomical sites where specimens are collected for Botswana AMR surveillance",
  "compose" : {
    "include" : [
      {
        "system" : "http://snomed.info/sct",
        "concept" : [
          {
            "code" : "87612001",
            "display" : "Blood"
          },
          {
            "code" : "68171009",
            "display" : "Urine"
          },
          {
            "code" : "119334006",
            "display" : "Sputum specimen"
          },
          {
            "code" : "258580003",
            "display" : "Wound"
          },
          {
            "code" : "69695003",
            "display" : "Cerebrospinal fluid"
          },
          {
            "code" : "119339001",
            "display" : "Stool specimen"
          },
          {
            "code" : "321667001",
            "display" : "Respiratory tract structure"
          },
          {
            "code" : "45206002",
            "display" : "Nasal cavity structure"
          },
          {
            "code" : "123851003",
            "display" : "Mouth region structure"
          },
          {
            "code" : "69536005",
            "display" : "Head structure"
          },
          {
            "code" : "416775004",
            "display" : "Throat structure"
          },
          {
            "code" : "76784001",
            "display" : "Vaginal structure"
          },
          {
            "code" : "13648007",
            "display" : "Urethral structure"
          },
          {
            "code" : "127949000",
            "display" : "Catheter tip"
          },
          {
            "code" : "119376003",
            "display" : "Tissue specimen"
          },
          {
            "code" : "74964007",
            "display" : "Other"
          }
        ]
      }
    ]
  }
}